Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | SCAB_RS34400 | Not Available | Positive | 7953748 - 7954473 | 26155.0 |
| adp-ribosylglycohydrolase family protein | SCAB_RS34405 | Not Available | Positive | 7954473 - 7955495 | 36526.3 |
| dna polymerase beta superfamily protein | SCAB_RS34410 | Not Available | Positive | 7955499 - 7956272 | 28648.3 |
| dna polymerase beta superfamily protein | SCAB_RS34415 | Not Available | Negative | 7956284 - 7956979 | 26346.6 |
| rieske (2fe-2s) protein | SCAB_RS34420 | Not Available | Negative | 7957002 - 7957439 | 14222.7 |
| chorismate mutase | SCAB_RS34425 | Not Available | Positive | 7957747 - 7958109 | 13101.7 |
| prephenate dehydrogenase | SCAB_RS34430 | Not Available | Positive | 7958106 - 7959191 | 38011.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46670 | Not Available | Positive | 7959296 - 7959415 | 4254.26 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46675 | Not Available | Positive | 7959520 - 7959639 | 4254.26 |
| (d)cmp kinase | SCAB_RS34435 | Not Available | Positive | 7959840 - 7960517 | 23389.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |