Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48755 | Not Available | Negative | 7916599 - 7916736 | 5391.34 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS43880 | Not Available | Positive | 7916879 - 7917271 | 13692.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 7917808 - 7919333 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 7919643 - 7922763 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 7922869 - 7922985 | Not Available |
| hypothetical protein | SCAB_RS47985 | Not Available | Positive | 7923175 - 7924452 | 39706.1 |
| hypothetical protein | SCAB_RS47990 | Not Available | Positive | 7924404 - 7925270 | 31009.5 |
| duf1015 family protein | SCAB_RS34285 | Not Available | Negative | 7925361 - 7926653 | 46897.0 |
| had hydrolase-like protein | SCAB_RS34290 | Not Available | Positive | 7926790 - 7927854 | 36242.1 |
| feccd family abc transporter permease | SCAB_RS34295 | Not Available | Positive | 7927955 - 7928998 | 35303.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |