Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SCAB_RS34215 | Not Available | Positive | 7909285 - 7910076 | 28959.2 |
| nfed family protein | SCAB_RS34220 | Not Available | Positive | 7910222 - 7910653 | 14596.0 |
| spfh domain-containing protein | SCAB_RS34225 | Not Available | Positive | 7910812 - 7911759 | 34418.6 |
| hnh endonuclease | SCAB_RS34230 | Not Available | Negative | 7911890 - 7912396 | 18815.7 |
| ybhb/ybcl family raf kinase inhibitor-like protein | SCAB_RS34235 | Not Available | Negative | 7912548 - 7913087 | 19003.0 |
| sporulation protein | SCAB_RS34240 | Not Available | Negative | 7913130 - 7913912 | 28700.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48740 | Not Available | Positive | 7914123 - 7914380 | 9604.46 |
| dna-3-methyladenine glycosylase | SCAB_RS48745 | Not Available | Positive | 7914395 - 7915006 | 21435.4 |
| hypothetical protein | SCAB_RS34255 | Not Available | Positive | 7915174 - 7915692 | 19002.5 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48750 | Not Available | Negative | 7915823 - 7916482 | 24398.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |