Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallopeptidase tldd-related protein | SCAB_RS34120 | Not Available | Negative | 7888130 - 7889524 | 49741.4 |
| tldd/pmba family protein | SCAB_RS34125 | Not Available | Negative | 7889521 - 7891044 | 54744.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SCAB_RS34130 | Not Available | Positive | 7891308 - 7892027 | 25218.4 |
| enoyl-acp reductase fabi | SCAB_RS34135 | Not Available | Positive | 7892033 - 7892800 | 27206.8 |
| hypothetical protein | SCAB_RS34140 | Not Available | Positive | 7892979 - 7893314 | 12071.4 |
| fadr/gntr family transcriptional regulator | SCAB_RS34145 | Not Available | Negative | 7893289 - 7893984 | 24585.9 |
| cynx/nimt family mfs transporter | SCAB_RS34150 | Not Available | Positive | 7894055 - 7895419 | 45915.9 |
| sgm_5486 family transporter-associated protein | SCAB_RS49105 | Not Available | Positive | 7895470 - 7895586 | 4011.15 |
| hypothetical protein | SCAB_RS34155 | Not Available | Positive | 7895766 - 7895981 | 7549.4 |
| sixa phosphatase family protein | SCAB_RS34160 | Not Available | Positive | 7896079 - 7896597 | 18806.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |