Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS02625 | Not Available | Negative | 632897 - 634006 | 38244.1 |
| hypothetical protein | SCAB_RS02630 | Not Available | Negative | 634003 - 635061 | 37756.7 |
| spoiie family protein phosphatase | SCAB_RS02635 | Not Available | Positive | 635255 - 637381 | 74510.2 |
| atp-binding protein | SCAB_RS02640 | Not Available | Positive | 637517 - 637990 | 16123.2 |
| hypothetical protein | SCAB_RS02645 | Not Available | Negative | 638063 - 638485 | 14938.5 |
| hypothetical protein | SCAB_RS02650 | Not Available | Negative | 638548 - 638748 | 7002.91 |
| tigr03086 family metal-binding protein | SCAB_RS02655 | Not Available | Negative | 638826 - 639455 | 21912.3 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS02660 | Not Available | Negative | 639537 - 640232 | 24273.5 |
| helix-turn-helix transcriptional regulator | SCAB_RS02665 | Not Available | Positive | 640335 - 641213 | 31459.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | SCAB_RS02670 | Not Available | Negative | 641281 - 644499 | 117441.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |