Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | SCAB_RS33770 | Not Available | Positive | 7817433 - 7818650 | 43647.9 |
| right-handed parallel beta-helix repeat-containing protein | SCAB_RS33775 | Not Available | Positive | 7818686 - 7819798 | 37955.4 |
| hypothetical protein | SCAB_RS33780 | Not Available | Negative | 7820243 - 7821130 | 31209.9 |
| sige family rna polymerase sigma factor | SCAB_RS33785 | Not Available | Negative | 7821127 - 7821729 | 21706.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS33790 | Not Available | Positive | 7821999 - 7823451 | 52618.9 |
| peptidoglycan d,d-transpeptidase ftsi family protein | SCAB_RS33795 | Not Available | Negative | 7823524 - 7824975 | 50656.8 |
| iclr family transcriptional regulator | SCAB_RS33800 | Not Available | Negative | 7825094 - 7825867 | 28452.2 |
| aldehyde dehydrogenase (nadp(+)) | SCAB_RS33805 | Not Available | Positive | 7826015 - 7827544 | 52463.4 |
| duf1349 domain-containing protein | SCAB_RS33810 | Not Available | Positive | 7827671 - 7828279 | 22074.8 |
| dsba family oxidoreductase | SCAB_RS33815 | Not Available | Positive | 7828400 - 7829122 | 26257.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |