Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS49310 | Not Available | Positive | 7784336 - 7784974 | 22803.2 |
| 1-aminocyclopropane-1-carboxylate deaminase | SCAB_RS33625 | Not Available | Positive | 7785431 - 7786450 | 36035.9 |
| terd family protein | SCAB_RS33630 | Not Available | Negative | 7786535 - 7787758 | 42197.4 |
| hypothetical protein | SCAB_RS33635 | Not Available | Negative | 7787833 - 7788054 | 8299.68 |
| zinc-dependent alcohol dehydrogenase family protein | SCAB_RS33640 | Not Available | Negative | 7788215 - 7789204 | 34572.5 |
| carbohydrate abc transporter permease | SCAB_RS33645 | Not Available | Negative | 7789201 - 7790025 | 29011.2 |
| carbohydrate abc transporter permease | SCAB_RS33650 | Not Available | Negative | 7790022 - 7790960 | 34117.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS33655 | Not Available | Negative | 7790957 - 7792325 | 49593.0 |
| deor/glpr family dna-binding transcription regulator | SCAB_RS33660 | Not Available | Negative | 7792413 - 7793174 | 26733.0 |
| nad-dependent epimerase/dehydratase family protein | SCAB_RS33665 | Not Available | Negative | 7793479 - 7794288 | 29125.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |