Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SCAB_RS33215 | Not Available | Negative | 7694025 - 7695335 | 45428.3 |
| s66 peptidase family protein | SCAB_RS33220 | Not Available | Negative | 7695425 - 7696471 | 38365.7 |
| type ii 3-dehydroquinate dehydratase | SCAB_RS33225 | Not Available | Positive | 7696575 - 7697048 | 16725.8 |
| amino acid abc transporter atp-binding protein | SCAB_RS33230 | Not Available | Negative | 7697102 - 7697884 | 28447.3 |
| amino acid abc transporter permease | SCAB_RS33235 | Not Available | Negative | 7697881 - 7698798 | 32961.5 |
| abc transporter substrate-binding protein | SCAB_RS33240 | Not Available | Negative | 7698795 - 7699694 | 31306.6 |
| mbl fold metallo-hydrolase | SCAB_RS33245 | Not Available | Negative | 7700024 - 7700680 | 23345.3 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | SCAB_RS33250 | Not Available | Negative | 7700690 - 7701376 | 24673.9 |
| excinuclease abc subunit uvra | SCAB_RS33255 | Not Available | Positive | 7701602 - 7704676 | 112102.0 |
| helix-turn-helix domain-containing protein | SCAB_RS33260 | Not Available | Positive | 7704916 - 7705779 | 31154.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |