Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | SCAB_RS32865 | Not Available | Positive | 7615169 - 7615690 | 19059.8 |
| aminopeptidase n | SCAB_RS32870 | Not Available | Positive | 7615781 - 7618285 | 92582.4 |
| pyridoxal phosphate-dependent decarboxylase family protein | SCAB_RS32875 | Not Available | Positive | 7618520 - 7619893 | 47365.6 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | SCAB_RS32880 | Not Available | Positive | 7619890 - 7621326 | 53505.5 |
| is5 family transposase | SCAB_RS45430 | Not Available | Positive | 7621486 - 7622360 | 33010.7 |
| 5'-nucleotidase c-terminal domain-containing protein | SCAB_RS32895 | Not Available | Negative | 7622382 - 7624193 | 65329.9 |
| simpl domain-containing protein | SCAB_RS32900 | Not Available | Positive | 7624402 - 7625121 | 26285.2 |
| pyruvate kinase | SCAB_RS32905 | Not Available | Positive | 7625269 - 7626705 | 51358.3 |
| helix-turn-helix domain-containing protein | SCAB_RS32910 | Not Available | Negative | 7626710 - 7627498 | 30158.1 |
| Trna-leu | Not Available | Not Available | Positive | 7627583 - 7627665 | Not Available |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |