Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase family protein | SCAB_RS32765 | Not Available | Negative | 7590375 - 7591856 | 50191.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS32770 | Not Available | Negative | 7592510 - 7593601 | 37241.9 |
| vit1/ccc1 transporter family protein | SCAB_RS32775 | Not Available | Positive | 7593857 - 7594585 | 25073.1 |
| glutamate synthase large subunit | SCAB_RS32780 | Not Available | Positive | 7594974 - 7599581 | 165522.0 |
| glutamate synthase subunit beta | SCAB_RS32785 | Not Available | Positive | 7599574 - 7601034 | 52541.4 |
| rhomboid family intramembrane serine protease | SCAB_RS32790 | Not Available | Negative | 7601195 - 7602124 | 33290.9 |
| vwa domain-containing protein | SCAB_RS32795 | Not Available | Positive | 7602269 - 7602988 | 26050.0 |
| acyl-coa dehydrogenase family protein | SCAB_RS32800 | Not Available | Negative | 7603004 - 7603981 | 34173.3 |
| acyl-coa dehydrogenase family protein | SCAB_RS32805 | Not Available | Negative | 7603981 - 7605120 | 40857.0 |
| sdr family oxidoreductase | SCAB_RS32810 | Not Available | Positive | 7605278 - 7606075 | 27960.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |