Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase trpc | SCAB_RS32720 | Not Available | Positive | 7580053 - 7580862 | 28246.6 |
| tryptophan biosynthesis modulator trpm | SCAB_RS49450 | Not Available | Positive | 7581014 - 7581190 | 6685.15 |
| tryptophan synthase subunit beta | SCAB_RS32725 | Not Available | Positive | 7581412 - 7582695 | 45549.8 |
| tryptophan synthase subunit alpha | SCAB_RS32730 | Not Available | Positive | 7582692 - 7583510 | 27810.2 |
| dsba family protein | SCAB_RS32735 | Not Available | Positive | 7583650 - 7584426 | 27476.3 |
| prolipoprotein diacylglyceryl transferase | SCAB_RS32740 | Not Available | Positive | 7584555 - 7585544 | 35660.5 |
| hpch/hpai aldolase/citrate lyase family protein | SCAB_RS32745 | Not Available | Negative | 7585760 - 7586614 | 29507.3 |
| caib/baif coa transferase family protein | SCAB_RS32750 | Not Available | Negative | 7586611 - 7587810 | 42709.9 |
| adp-ribosylglycohydrolase family protein | SCAB_RS32755 | Not Available | Negative | 7587807 - 7589204 | 49382.4 |
| adp-ribosylglycohydrolase family protein | SCAB_RS32760 | Not Available | Negative | 7589201 - 7590367 | 41132.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |