Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | SCAB_RS32670 | Not Available | Positive | 7572729 - 7573370 | 23030.4 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | SCAB_RS32675 | Not Available | Positive | 7573370 - 7574098 | 25294.1 |
| rida family protein | SCAB_RS32680 | Not Available | Positive | 7574095 - 7574487 | 14143.8 |
| imidazole glycerol phosphate synthase subunit hisf | SCAB_RS32685 | Not Available | Positive | 7574553 - 7575308 | 26588.6 |
| tigr03085 family metal-binding protein | SCAB_RS32690 | Not Available | Negative | 7575371 - 7576006 | 23893.7 |
| phosphoribosyl-amp cyclohydrolase | SCAB_RS32695 | Not Available | Positive | 7576190 - 7576645 | 16014.6 |
| anthranilate synthase component i | SCAB_RS32700 | Not Available | Positive | 7576657 - 7578135 | 53052.0 |
| tigr02234 family membrane protein | SCAB_RS32705 | Not Available | Positive | 7578187 - 7578834 | 21837.1 |
| hgxxpaaw family protein | SCAB_RS32710 | Not Available | Positive | 7579003 - 7579275 | 9083.19 |
| duf2752 domain-containing protein | SCAB_RS32715 | Not Available | Positive | 7579349 - 7579816 | 16107.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |