Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SCAB_RS32475 | Not Available | Positive | 7524656 - 7525729 | 38266.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | SCAB_RS32480 | Not Available | Positive | 7525711 - 7527147 | 49680.7 |
| putative lipid ii flippase ftsw | SCAB_RS32485 | Not Available | Positive | 7527236 - 7528585 | 47951.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | SCAB_RS32490 | Not Available | Positive | 7528592 - 7529680 | 38608.2 |
| cell division protein ftsq/divib | SCAB_RS32495 | Not Available | Positive | 7529705 - 7530502 | 27632.3 |
| cell division protein ftsz | SCAB_RS32500 | Not Available | Positive | 7530782 - 7531972 | 40653.3 |
| peptidoglycan editing factor pgef | SCAB_RS32505 | Not Available | Positive | 7531969 - 7532697 | 25024.7 |
| yggs family pyridoxal phosphate-dependent enzyme | SCAB_RS32510 | Not Available | Positive | 7532703 - 7533422 | 25057.0 |
| cell division protein sepf | SCAB_RS32515 | Not Available | Positive | 7533551 - 7534192 | 23821.9 |
| yggt family protein | SCAB_RS32520 | Not Available | Positive | 7534243 - 7534533 | 11001.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |