Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | SCAB_RS32025 | Not Available | Negative | 7422626 - 7424014 | 48794.7 |
| leucyl aminopeptidase | SCAB_RS32030 | Not Available | Negative | 7424306 - 7425844 | 51677.8 |
| endo alpha-1,4 polygalactosaminidase | SCAB_RS32035 | Not Available | Positive | 7426217 - 7427011 | 29523.8 |
| adenosylcobinamide-gdp ribazoletransferase | SCAB_RS32040 | Not Available | Negative | 7427055 - 7427864 | 26112.2 |
| hypothetical protein | SCAB_RS32045 | Not Available | Positive | 7427935 - 7428789 | 30783.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SCAB_RS32055 | Not Available | Negative | 7429708 - 7430826 | 38494.9 |
| class i sam-dependent methyltransferase | SCAB_RS32060 | Not Available | Positive | 7431018 - 7431896 | 32841.9 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | SCAB_RS32065 | Not Available | Negative | 7431885 - 7433090 | 41913.0 |
| hypothetical protein | SCAB_RS32070 | Not Available | Positive | 7433218 - 7433430 | 7830.87 |
| class i sam-dependent methyltransferase | SCAB_RS32075 | Not Available | Negative | 7433740 - 7434453 | 25049.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |