Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-2 protease family protein | SCAB_RS31680 | Not Available | Negative | 7340716 - 7341516 | 28643.2 |
| afsr/sarp family transcriptional regulator | SCAB_RS31685 | Not Available | Positive | 7341720 - 7345100 | 122055.0 |
| abc transporter permease | SCAB_RS31690 | Not Available | Negative | 7345132 - 7345962 | 29422.6 |
| atp-binding cassette domain-containing protein | SCAB_RS31695 | Not Available | Negative | 7345959 - 7346984 | 36111.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SCAB_RS31700 | Not Available | Negative | 7347113 - 7347979 | 30418.7 |
| mfs transporter | SCAB_RS31705 | Not Available | Positive | 7348169 - 7349746 | 54844.3 |
| tetr/acrr family transcriptional regulator | SCAB_RS31710 | Not Available | Positive | 7349793 - 7350428 | 23174.2 |
| endonuclease/exonuclease/phosphatase family protein | SCAB_RS31715 | Not Available | Positive | 7350612 - 7351661 | 37158.9 |
| mfs transporter | SCAB_RS31720 | Not Available | Positive | 7351784 - 7353016 | 40780.6 |
| gnat family n-acetyltransferase | SCAB_RS31725 | Not Available | Positive | 7353227 - 7353769 | 19266.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |