Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SCAB_RS31390 | Not Available | Positive | 7261789 - 7262613 | 29740.3 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS49440 | Not Available | Positive | 7262695 - 7263411 | 24826.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 7263539 - 7263947 | Not Available |
| swim zinc finger family protein | SCAB_RS31400 | Not Available | Positive | 7264082 - 7265764 | 60773.8 |
| uvrd-helicase domain-containing protein | SCAB_RS31405 | Not Available | Negative | 7265806 - 7268079 | 84428.1 |
| dead/deah box helicase | SCAB_RS31410 | Not Available | Negative | 7268076 - 7275056 | 254495.0 |
| hypothetical protein | SCAB_RS31415 | Not Available | Negative | 7275171 - 7275818 | 24258.4 |
| aaa family atpase | SCAB_RS31420 | Not Available | Negative | 7275815 - 7277026 | 44447.1 |
| beta family protein | SCAB_RS31425 | Not Available | Positive | 7277323 - 7278384 | 38572.1 |
| caspase, eacc1-associated type | SCAB_RS31430 | Not Available | Negative | 7278414 - 7282355 | 141500.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |