Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS47860 | Not Available | Negative | 7251600 - 7251764 | 5846.6 |
| hypothetical protein | SCAB_RS31345 | Not Available | Negative | 7251896 - 7253491 | 54134.2 |
| nif3-like dinuclear metal center hexameric protein | SCAB_RS31350 | Not Available | Positive | 7253735 - 7254622 | 30949.3 |
| zinc ribbon domain-containing protein | SCAB_RS31355 | Not Available | Positive | 7254619 - 7255362 | 27659.4 |
| bifunctional rnase h/acid phosphatase | SCAB_RS31360 | Not Available | Positive | 7255384 - 7256862 | 50530.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | SCAB_RS31365 | Not Available | Negative | 7256848 - 7257465 | 20884.4 |
| peroxide stress protein yaaa | SCAB_RS31370 | Not Available | Negative | 7257695 - 7258477 | 27064.9 |
| rnb domain-containing ribonuclease | SCAB_RS31375 | Not Available | Positive | 7258636 - 7260180 | 55014.3 |
| hypothetical protein | SCAB_RS31380 | Not Available | Negative | 7260131 - 7260796 | 24428.1 |
| merr family transcriptional regulator | SCAB_RS31385 | Not Available | Negative | 7260793 - 7261611 | 29144.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |