Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ei24 domain-containing protein | SCAB_RS30575 | Not Available | Positive | 7099118 - 7099945 | 30246.2 |
| hypothetical protein | SCAB_RS30580 | Not Available | Negative | 7099980 - 7101329 | 46884.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS30585 | Not Available | Negative | 7101472 - 7102068 | 21685.0 |
| glycoside hydrolase family 3 protein | SCAB_RS30590 | Not Available | Positive | 7102180 - 7104645 | 86713.0 |
| sgnh/gdsl hydrolase family protein | SCAB_RS30595 | Not Available | Negative | 7104763 - 7105662 | 31829.7 |
| duf3145 domain-containing protein | SCAB_RS30600 | Not Available | Positive | 7105939 - 7106433 | 18116.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | SCAB_RS30605 | Not Available | Negative | 7106539 - 7107810 | 43488.2 |
| acyl carrier protein | SCAB_RS30610 | Not Available | Negative | 7107915 - 7108163 | 8903.41 |
| ketoacyl-acp synthase iii | SCAB_RS30615 | Not Available | Negative | 7108267 - 7109298 | 36084.8 |
| acp s-malonyltransferase | SCAB_RS30620 | Not Available | Negative | 7109312 - 7110226 | 30724.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |