Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | SCAB_RS30525 | Not Available | Positive | 7088778 - 7090310 | 55268.9 |
| abc transporter permease | SCAB_RS30530 | Not Available | Positive | 7090322 - 7091452 | 38593.1 |
| galactofuranose abc transporter, permease protein yjff | SCAB_RS30535 | Not Available | Positive | 7091452 - 7092486 | 36188.1 |
| gnat family n-acetyltransferase | SCAB_RS30540 | Not Available | Negative | 7092554 - 7093003 | 15918.2 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS30545 | Not Available | Negative | 7093045 - 7093482 | 15963.4 |
| nadp-dependent oxidoreductase | SCAB_RS30550 | Not Available | Positive | 7093609 - 7094631 | 36299.3 |
| esta family serine hydrolase | SCAB_RS30555 | Not Available | Negative | 7094755 - 7095915 | 40587.1 |
| serine/threonine-protein kinase | SCAB_RS30560 | Not Available | Positive | 7096057 - 7097121 | 39122.2 |
| tetr/acrr family transcriptional regulator | SCAB_RS30565 | Not Available | Positive | 7097241 - 7097819 | 20595.3 |
| gdsl-type esterase/lipase family protein | SCAB_RS30570 | Not Available | Positive | 7097885 - 7099078 | 42862.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |