Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase family protein | SCAB_RS30475 | Not Available | Negative | 7076090 - 7077133 | 37517.4 |
| multiple monosaccharide abc transporter permease | SCAB_RS30480 | Not Available | Negative | 7077204 - 7078445 | 43140.3 |
| multiple monosaccharide abc transporter atp-binding protein | SCAB_RS30485 | Not Available | Negative | 7078442 - 7079992 | 56717.5 |
| multiple monosaccharide abc transporter substrate-binding protein | SCAB_RS30490 | Not Available | Negative | 7080036 - 7081148 | 39844.0 |
| hypothetical protein | SCAB_RS30495 | Not Available | Negative | 7081285 - 7082253 | 34551.3 |
| zinc-dependent alcohol dehydrogenase | SCAB_RS30500 | Not Available | Negative | 7082387 - 7083427 | 35691.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | SCAB_RS30505 | Not Available | Negative | 7083424 - 7084581 | 42347.5 |
| hypothetical protein | SCAB_RS30510 | Not Available | Positive | 7085085 - 7085747 | 22252.9 |
| laci family dna-binding transcriptional regulator | SCAB_RS30515 | Not Available | Positive | 7086173 - 7087219 | 37096.1 |
| substrate-binding domain-containing protein | SCAB_RS30520 | Not Available | Positive | 7087360 - 7088370 | 35969.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |