Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aac(3) family n-acetyltransferase | SCAB_RS30280 | Not Available | Negative | 7030162 - 7030935 | 28128.4 |
| radical sam/spasm protein fxsbh, inactivated beta-hydroxylase extension form | SCAB_RS30285 | Not Available | Negative | 7030928 - 7033084 | 78008.8 |
| fxsxx-cooh cyclophane-containing ripp peptide | SCAB_RS30290 | Not Available | Negative | 7033182 - 7033361 | 6512.71 |
| duf4231 domain-containing protein | SCAB_RS30295 | Not Available | Positive | 7033593 - 7034507 | 33418.2 |
| hypothetical protein | SCAB_RS30300 | Not Available | Negative | 7034535 - 7035026 | 17606.0 |
| rod shape-determining protein | SCAB_RS30305 | Not Available | Negative | 7035301 - 7036338 | 36093.4 |
| carboxyl transferase domain-containing protein | SCAB_RS30310 | Not Available | Negative | 7036534 - 7038012 | 51062.6 |
| acyl-coa synthetase | SCAB_RS30315 | Not Available | Negative | 7038005 - 7039510 | 52415.3 |
| hypothetical protein | SCAB_RS30320 | Not Available | Positive | 7039757 - 7040449 | 24884.2 |
| nucleotidyl transferase abieii/abigii toxin family protein | SCAB_RS30325 | Not Available | Positive | 7040446 - 7041447 | 36239.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |