Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmpl family transporter | SCAB_RS30125 | Not Available | Positive | 6987250 - 6989643 | 82112.9 |
| had family hydrolase | SCAB_RS30130 | Not Available | Positive | 6990435 - 6991109 | 24631.5 |
| fad-dependent monooxygenase | SCAB_RS30135 | Not Available | Positive | 6991106 - 6992752 | 57324.3 |
| scba/barx family gamma-butyrolactone biosynthesis protein | SCAB_RS30140 | Not Available | Positive | 6992805 - 6993824 | 36672.5 |
| dna-binding response regulator | SCAB_RS30145 | Not Available | Positive | 6993934 - 6994539 | 21380.1 |
| sensor histidine kinase | SCAB_RS30150 | Not Available | Negative | 6994617 - 6995870 | 44378.9 |
| sagb family peptide dehydrogenase | SCAB_RS30155 | Not Available | Negative | 6995958 - 6997622 | 59247.6 |
| tomm precursor leader peptide-binding protein | SCAB_RS30160 | Not Available | Negative | 6997682 - 7000078 | 85858.2 |
| tigr04351 family putative tomm peptide | SCAB_RS30165 | Not Available | Negative | 7000075 - 7000392 | 11610.6 |
| afsr/sarp family transcriptional regulator | SCAB_RS30170 | Not Available | Positive | 7000688 - 7001524 | 29828.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |