Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase family protein | SCAB_RS30075 | Not Available | Positive | 6973848 - 6974741 | 32235.1 |
| alpha/beta fold hydrolase | SCAB_RS30080 | Not Available | Positive | 6975063 - 6976301 | 44435.2 |
| hypothetical protein | SCAB_RS30085 | Not Available | Positive | 6976670 - 6976912 | 8636.16 |
| alpha/beta fold hydrolase | SCAB_RS30090 | Not Available | Positive | 6976916 - 6977944 | 37242.1 |
| afsr/sarp family transcriptional regulator | SCAB_RS30095 | Not Available | Negative | 6978035 - 6980794 | 98666.1 |
| afsa-related hotdog domain-containing protein | SCAB_RS30100 | Not Available | Negative | 6980864 - 6981889 | 36553.4 |
| ferredoxin | SCAB_RS30105 | Not Available | Negative | 6982134 - 6982445 | 10866.7 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | SCAB_RS30110 | Not Available | Negative | 6982533 - 6983579 | 37368.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | SCAB_RS30115 | Not Available | Negative | 6983569 - 6985482 | 68371.2 |
| smp-30/gluconolactonase/lre family protein | SCAB_RS30120 | Not Available | Positive | 6986114 - 6987145 | 36271.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |