Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | SCAB_RS29585 | Not Available | Negative | 6852705 - 6853361 | 23828.1 |
| afsr/sarp family transcriptional regulator | SCAB_RS29590 | Not Available | Negative | 6853696 - 6856770 | 109535.0 |
| hypothetical protein | SCAB_RS29595 | Not Available | Positive | 6857329 - 6857559 | 8136.64 |
| dna repair protein reco | SCAB_RS29600 | Not Available | Positive | 6857717 - 6858466 | 27079.5 |
| isoprenyl transferase | SCAB_RS29605 | Not Available | Positive | 6858577 - 6859413 | 32030.2 |
| ycxb family protein | SCAB_RS29610 | Not Available | Positive | 6859417 - 6859941 | 18413.5 |
| fur family transcriptional regulator | SCAB_RS29615 | Not Available | Negative | 6859993 - 6860406 | 14688.2 |
| metal abc transporter permease | SCAB_RS29620 | Not Available | Negative | 6860485 - 6861441 | 32741.9 |
| metal abc transporter atp-binding protein | SCAB_RS29625 | Not Available | Negative | 6861455 - 6862222 | 27144.0 |
| metal abc transporter substrate-binding protein | SCAB_RS29630 | Not Available | Negative | 6862251 - 6863213 | 33852.6 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |