Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | SCAB_RS28565 | Not Available | Positive | 6663249 - 6663734 | 17261.1 |
| fpg/nei family dna glycosylase | SCAB_RS28570 | Not Available | Positive | 6663889 - 6664713 | 30119.9 |
| is630 family transposase | SCAB_RS28575 | Not Available | Negative | 6664724 - 6665809 | 40671.9 |
| gnat family n-acetyltransferase | SCAB_RS28580 | Not Available | Negative | 6665911 - 6667155 | 45147.6 |
| pp2c family protein-serine/threonine phosphatase | SCAB_RS28585 | Not Available | Positive | 6667381 - 6668556 | 41707.7 |
| hd domain-containing protein | SCAB_RS28590 | Not Available | Positive | 6668830 - 6669315 | 17382.4 |
| acyltransferase family protein | SCAB_RS28595 | Not Available | Negative | 6669394 - 6670596 | 45382.3 |
| hypothetical protein | SCAB_RS28600 | Not Available | Positive | 6671173 - 6671367 | 6725.56 |
| Trna-gly | Not Available | Not Available | Positive | 6671490 - 6671563 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 6671741 - 6671817 | Not Available |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |