Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | SCAB_RS28065 | Not Available | Negative | 6543922 - 6544161 | 7787.04 |
| tetr/acrr family transcriptional regulator | SCAB_RS28070 | Not Available | Negative | 6544278 - 6544955 | 24200.9 |
| mmpl family transporter | SCAB_RS28075 | Not Available | Positive | 6545143 - 6547395 | 79197.5 |
| zinc-dependent alcohol dehydrogenase family protein | SCAB_RS28080 | Not Available | Positive | 6547689 - 6548786 | 37099.2 |
| gnat family n-acetyltransferase | SCAB_RS28085 | Not Available | Negative | 6548767 - 6549378 | 22434.5 |
| helix-turn-helix transcriptional regulator | SCAB_RS28090 | Not Available | Negative | 6549481 - 6549681 | 7688.99 |
| sugar phosphate isomerase/epimerase family protein | SCAB_RS28095 | Not Available | Negative | 6550022 - 6550939 | 33547.6 |
| 5-dehydro-2-deoxygluconokinase | SCAB_RS28100 | Not Available | Positive | 6551064 - 6552014 | 33532.9 |
| hypothetical protein | SCAB_RS28105 | Not Available | Positive | 6552011 - 6552895 | 31232.5 |
| 5-deoxy-glucuronate isomerase | SCAB_RS28110 | Not Available | Positive | 6552903 - 6553751 | 30457.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |