Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630 family transposase | SCAB_RS27680 | Not Available | Positive | 6451120 - 6452205 | 40671.9 |
| siderophore-interacting protein | SCAB_RS27685 | Not Available | Negative | 6452202 - 6453011 | 29901.2 |
| abc transporter substrate-binding protein | SCAB_RS27690 | Not Available | Negative | 6453279 - 6454331 | 36950.8 |
| acyl-coa dehydrogenase family protein | SCAB_RS27695 | Not Available | Negative | 6454685 - 6455845 | 41805.9 |
| hydroxymethylglutaryl-coa lyase | SCAB_RS27700 | Not Available | Negative | 6455851 - 6456801 | 33427.0 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | SCAB_RS27705 | Not Available | Negative | 6456798 - 6458861 | 71951.1 |
| carboxyl transferase domain-containing protein | SCAB_RS27710 | Not Available | Negative | 6458881 - 6460497 | 57331.4 |
| tetr/acrr family transcriptional regulator | SCAB_RS27715 | Not Available | Positive | 6460603 - 6461199 | 21205.5 |
| acyl-coa dehydrogenase family protein | SCAB_RS27720 | Not Available | Positive | 6461400 - 6462557 | 42277.1 |
| acyl-coa thioesterase | SCAB_RS27725 | Not Available | Positive | 6462593 - 6463489 | 32602.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |