Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3592 domain-containing protein | SCAB_RS27390 | Not Available | Positive | 6389263 - 6389733 | 17658.2 |
| long-chain-fatty-acid--coa ligase | SCAB_RS27395 | Not Available | Positive | 6389774 - 6391420 | 59540.5 |
| sensor histidine kinase | SCAB_RS27400 | Not Available | Positive | 6391491 - 6392729 | 43333.2 |
| response regulator transcription factor | SCAB_RS27405 | Not Available | Positive | 6392714 - 6393367 | 22922.8 |
| Trna-lys | Not Available | Not Available | Positive | 6393487 - 6393563 | Not Available |
| iclr family transcriptional regulator | SCAB_RS27415 | Not Available | Negative | 6393691 - 6394449 | 27135.3 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | SCAB_RS27420 | Not Available | Negative | 6394664 - 6395443 | 28573.4 |
| ectoine/hydroxyectoine abc transporter permease subunit ehud | SCAB_RS27425 | Not Available | Negative | 6395475 - 6396125 | 23931.7 |
| ectoine/hydroxyectoine abc transporter permease subunit ehuc | SCAB_RS27430 | Not Available | Negative | 6396122 - 6396976 | 29788.6 |
| ectoine/hydroxyectoine abc transporter substrate-binding protein ehub | SCAB_RS27435 | Not Available | Negative | 6396973 - 6397908 | 33734.5 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |