Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mov34/mpn/pad-1 family protein | SCAB_RS26960 | Not Available | Positive | 6298089 - 6298511 | 15707.2 |
| laci family dna-binding transcriptional regulator | SCAB_RS26965 | Not Available | Positive | 6298594 - 6299658 | 38555.1 |
| putative leader peptide | SCAB_RS49290 | Not Available | Positive | 6299769 - 6299864 | 3310.14 |
| moad/this family protein | SCAB_RS26970 | Not Available | Positive | 6299977 - 6300255 | 9984.91 |
| plp-dependent cysteine synthase family protein | SCAB_RS26975 | Not Available | Positive | 6300262 - 6301212 | 33774.2 |
| type ii toxin-antitoxin system pemk/mazf family toxin | SCAB_RS26980 | Not Available | Negative | 6301483 - 6301947 | 17180.8 |
| mbl fold metallo-hydrolase | SCAB_RS26985 | Not Available | Positive | 6302299 - 6303051 | 27203.0 |
| pts transporter subunit eiic | SCAB_RS26990 | Not Available | Negative | 6303123 - 6304373 | 44210.5 |
| leucyl aminopeptidase family protein | SCAB_RS26995 | Not Available | Negative | 6304534 - 6305976 | 49354.8 |
| duf2087 domain-containing protein | SCAB_RS27000 | Not Available | Negative | 6305981 - 6306553 | 20545.1 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |