Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | SCAB_RS26370 | Not Available | Negative | 6151021 - 6152355 | 45025.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | SCAB_RS26375 | Not Available | Positive | 6152496 - 6153641 | 39478.9 |
| two-component system response regulator mtra | SCAB_RS26380 | Not Available | Positive | 6153650 - 6154339 | 25245.9 |
| mtrab system histidine kinase mtrb | SCAB_RS26385 | Not Available | Positive | 6154341 - 6156428 | 73702.8 |
| lpqb family beta-propeller domain-containing protein | SCAB_RS26390 | Not Available | Positive | 6156418 - 6158253 | 65049.8 |
| comf family protein | SCAB_RS26395 | Not Available | Positive | 6158442 - 6159245 | 27221.9 |
| ribosome hibernation-promoting factor, hpf/yfia family | SCAB_RS26400 | Not Available | Positive | 6159560 - 6160252 | 25366.2 |
| response regulator | SCAB_RS26405 | Not Available | Positive | 6160458 - 6161207 | 27208.8 |
| winged helix-turn-helix domain-containing protein | SCAB_RS26410 | Not Available | Negative | 6161262 - 6162425 | 43302.8 |
| gnat family n-acetyltransferase | SCAB_RS26415 | Not Available | Negative | 6162538 - 6163107 | 20831.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |