Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS25775 | Not Available | Negative | 5999353 - 5999850 | 18695.3 |
| trans-aconitate 2-methyltransferase | SCAB_RS25780 | Not Available | Positive | 5999985 - 6000800 | 29723.9 |
| mfs transporter | SCAB_RS25785 | Not Available | Positive | 6000930 - 6002300 | 47328.6 |
| paax family transcriptional regulator c-terminal domain-containing protein | SCAB_RS25790 | Not Available | Positive | 6002470 - 6003333 | 32286.5 |
| glycosyltransferase family 4 protein | SCAB_RS25795 | Not Available | Positive | 6003801 - 6005885 | 75102.1 |
| tetr/acrr family transcriptional regulator | SCAB_RS25800 | Not Available | Negative | 6005981 - 6006658 | 24773.8 |
| acyl-coa desaturase | SCAB_RS25805 | Not Available | Negative | 6006655 - 6007689 | 38351.9 |
| phosphoenolpyruvate carboxylase | SCAB_RS25810 | Not Available | Positive | 6008072 - 6010804 | 101249.0 |
| hypothetical protein | SCAB_RS25815 | Not Available | Negative | 6010994 - 6011527 | 18353.6 |
| aminoacyl-trna hydrolase | SCAB_RS25820 | Not Available | Negative | 6011606 - 6012208 | 21677.1 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |