Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS25675 | Not Available | Positive | 5973459 - 5973866 | 15059.5 |
| tatd family hydrolase | SCAB_RS25680 | Not Available | Positive | 5973926 - 5974828 | 31812.5 |
| resuscitation-promoting factor | SCAB_RS25685 | Not Available | Positive | 5974984 - 5976444 | 51696.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | SCAB_RS25690 | Not Available | Positive | 5976644 - 5977594 | 33169.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | SCAB_RS25695 | Not Available | Positive | 5977591 - 5978505 | 30510.1 |
| acyltransferase family protein | SCAB_RS25700 | Not Available | Positive | 5978573 - 5979970 | 49256.1 |
| abc-f family atp-binding cassette domain-containing protein | SCAB_RS25710 | Not Available | Positive | 5980486 - 5982297 | 66670.6 |
| pqq-binding-like beta-propeller repeat protein | SCAB_RS25715 | Not Available | Positive | 5982630 - 5984420 | 62239.3 |
| pqq-binding-like beta-propeller repeat protein | SCAB_RS25720 | Not Available | Positive | 5985075 - 5987042 | 68051.6 |
| helix-turn-helix transcriptional regulator | SCAB_RS25725 | Not Available | Positive | 5987316 - 5987999 | 23740.2 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |