Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt ecf transporter t component cbiq | SCAB_RS25460 | Not Available | Positive | 5926293 - 5927054 | 27553.3 |
| energy-coupling factor abc transporter atp-binding protein | SCAB_RS25465 | Not Available | Positive | 5927042 - 5927824 | 27831.8 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS25470 | Not Available | Positive | 5928136 - 5928609 | 17267.8 |
| organic hydroperoxide resistance protein | SCAB_RS25475 | Not Available | Positive | 5928762 - 5929232 | 16086.1 |
| serine hydrolase domain-containing protein | SCAB_RS25480 | Not Available | Positive | 5929399 - 5930577 | 41555.2 |
| duf1876 domain-containing protein | SCAB_RS25485 | Not Available | Negative | 5930834 - 5931109 | 10037.8 |
| hypothetical protein | SCAB_RS25490 | Not Available | Positive | 5931369 - 5931893 | 19019.0 |
| hypothetical protein | SCAB_RS25495 | Not Available | Negative | 5931887 - 5932360 | 17162.4 |
| hypothetical protein | SCAB_RS48655 | Not Available | Positive | 5932842 - 5933384 | 17914.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46530 | Not Available | Negative | 5933616 - 5933738 | 4013.18 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |