Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | SCAB_RS01790 | Not Available | Positive | 447236 - 448648 | 50215.6 |
| glycoside hydrolase family 27 protein | SCAB_RS01795 | Not Available | Positive | 448735 - 450381 | 57900.7 |
| mfs transporter | SCAB_RS01800 | Not Available | Negative | 450394 - 451641 | 42633.5 |
| arsr/smtb family transcription factor | SCAB_RS01805 | Not Available | Negative | 451694 - 452806 | 41400.6 |
| rna polymerase sigma factor sigj | SCAB_RS01810 | Not Available | Positive | 452976 - 453920 | 34001.7 |
| nad(p)/fad-dependent oxidoreductase | SCAB_RS01815 | Not Available | Positive | 454077 - 455303 | 42638.9 |
| arsr/smtb family transcription factor | SCAB_RS01820 | Not Available | Negative | 455370 - 455996 | 22668.9 |
| dienelactone hydrolase family protein | SCAB_RS01825 | Not Available | Positive | 456049 - 456618 | 20296.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46170 | Not Available | Positive | 456742 - 456906 | 5708.01 |
| tigr03086 family metal-binding protein | SCAB_RS01830 | Not Available | Positive | 456978 - 458573 | 56877.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |