Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-specific pts transporter subunit eiic | SCAB_RS25260 | Not Available | Positive | 5882413 - 5884569 | 72680.2 |
| hypothetical protein | SCAB_RS25265 | Not Available | Positive | 5884844 - 5885122 | 10357.5 |
| duf6227 family protein | SCAB_RS25270 | Not Available | Negative | 5885171 - 5885929 | 28133.6 |
| l,d-transpeptidase | SCAB_RS25275 | Not Available | Negative | 5886087 - 5887304 | 42260.6 |
| p1 family peptidase | SCAB_RS25280 | Not Available | Negative | 5887594 - 5888625 | 33871.3 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS25285 | Not Available | Negative | 5888615 - 5889882 | 45821.5 |
| hypothetical protein | SCAB_RS25290 | Not Available | Positive | 5890047 - 5890229 | 6511.32 |
| large conductance mechanosensitive channel protein mscl | SCAB_RS25295 | Not Available | Negative | 5890258 - 5890734 | 17173.0 |
| hypothetical protein | SCAB_RS25300 | Not Available | Negative | 5890837 - 5891481 | 21857.3 |
| s-methyl-5'-thioadenosine phosphorylase | SCAB_RS25305 | Not Available | Negative | 5891658 - 5892641 | 33905.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |