Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SCAB_RS45255 | Not Available | Positive | 5860981 - 5861418 | 15850.2 |
| hypothetical protein | SCAB_RS25165 | Not Available | Negative | 5861513 - 5861857 | 12986.5 |
| Trna-arg | Not Available | Not Available | Positive | 5861971 - 5862043 | Not Available |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS25175 | Not Available | Positive | 5862255 - 5863331 | 39106.3 |
| abc transporter permease | SCAB_RS25180 | Not Available | Positive | 5863539 - 5864354 | 29870.2 |
| abc transporter permease | SCAB_RS25185 | Not Available | Positive | 5864351 - 5865322 | 34614.1 |
| tetr/acrr family transcriptional regulator | SCAB_RS25190 | Not Available | Negative | 5865374 - 5866114 | 27425.6 |
| iclr family transcriptional regulator c-terminal domain-containing protein | SCAB_RS25195 | Not Available | Negative | 5866255 - 5868018 | 62516.0 |
| m6 family metalloprotease domain-containing protein | SCAB_RS25200 | Not Available | Negative | 5868305 - 5869663 | 48784.7 |
| tetr/acrr family transcriptional regulator | SCAB_RS25205 | Not Available | Positive | 5869935 - 5870588 | 23794.5 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |