Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | SCAB_RS24870 | Not Available | Positive | 5795203 - 5796090 | 30857.0 |
| sam-dependent methyltransferase | SCAB_RS24875 | Not Available | Negative | 5796134 - 5796976 | 30061.1 |
| ceha/mcba family metallohydrolase | SCAB_RS24880 | Not Available | Negative | 5797144 - 5798742 | 56877.0 |
| serine hydrolase domain-containing protein | SCAB_RS24885 | Not Available | Positive | 5798917 - 5799783 | 30664.9 |
| llm class f420-dependent oxidoreductase | SCAB_RS24890 | Not Available | Positive | 5799865 - 5800710 | 30187.1 |
| bifunctional fo biosynthesis protein cofgh | SCAB_RS24895 | Not Available | Positive | 5801147 - 5803732 | 93936.9 |
| duf2165 domain-containing protein | SCAB_RS24900 | Not Available | Negative | 5803779 - 5804300 | 18754.0 |
| tetratricopeptide repeat protein | SCAB_RS24905 | Not Available | Positive | 5804420 - 5807095 | 96156.5 |
| adp-ribosylglycohydrolase family protein | SCAB_RS24910 | Not Available | Positive | 5807418 - 5808533 | 38639.0 |
| gnat family n-acetyltransferase | SCAB_RS24915 | Not Available | Positive | 5808564 - 5809010 | 16607.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |