Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | SCAB_RS24620 | Not Available | Negative | 5739708 - 5740640 | 33288.7 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS24625 | Not Available | Positive | 5740776 - 5741687 | 31539.6 |
| acyl-coa dehydrogenase family protein | SCAB_RS24630 | Not Available | Positive | 5741756 - 5742922 | 42468.0 |
| zn-dependent alcohol dehydrogenase | SCAB_RS24635 | Not Available | Positive | 5742928 - 5743977 | 36349.7 |
| hypothetical protein | SCAB_RS24640 | Not Available | Positive | 5744057 - 5744593 | 18147.8 |
| flavin reductase family protein | SCAB_RS24645 | Not Available | Negative | 5744583 - 5745242 | 22811.2 |
| enoyl-coa hydratase/isomerase family protein | SCAB_RS24650 | Not Available | Negative | 5745375 - 5746199 | 29000.7 |
| acetate--coa ligase family protein | SCAB_RS24655 | Not Available | Negative | 5746324 - 5748576 | 79304.9 |
| flavin-containing monooxygenase | SCAB_RS24660 | Not Available | Negative | 5748936 - 5750150 | 43160.8 |
| brex-2 system adenine-specific dna-methyltransferase pglx | SCAB_RS24665 | Not Available | Negative | 5750343 - 5753939 | 133463.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |