Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | SCAB_RS24570 | Not Available | Positive | 5728260 - 5729141 | 32567.1 |
| zf-hc2 domain-containing protein | SCAB_RS24575 | Not Available | Negative | 5729371 - 5730699 | 46277.7 |
| sigma-70 family rna polymerase sigma factor | SCAB_RS24580 | Not Available | Negative | 5730696 - 5731277 | 21418.3 |
| stas domain-containing protein | SCAB_RS24585 | Not Available | Positive | 5731803 - 5732258 | 15911.8 |
| ef-hand domain-containing protein | SCAB_RS24590 | Not Available | Positive | 5732453 - 5732965 | 18306.0 |
| class i adenylate-forming enzyme family protein | SCAB_RS24595 | Not Available | Negative | 5732944 - 5734455 | 54560.4 |
| amidohydrolase family protein | SCAB_RS24600 | Not Available | Positive | 5734600 - 5735805 | 45290.8 |
| acyl-coa dehydrogenase family protein | SCAB_RS24605 | Not Available | Positive | 5735817 - 5736947 | 41300.9 |
| acyl-coa dehydrogenase family protein | SCAB_RS24610 | Not Available | Positive | 5737019 - 5738020 | 34898.8 |
| atp-binding protein | SCAB_RS24615 | Not Available | Positive | 5738535 - 5739128 | 20095.1 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |