Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | SCAB_RS24470 | Not Available | Positive | 5701816 - 5703414 | 56678.9 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | SCAB_RS24475 | Not Available | Positive | 5703420 - 5705270 | 65780.4 |
| acyl-coa dehydrogenase family protein | SCAB_RS24480 | Not Available | Positive | 5705381 - 5706544 | 41631.0 |
| 4-coumarate--coa ligase family protein | SCAB_RS24485 | Not Available | Positive | 5706766 - 5708334 | 55778.2 |
| enoyl-coa hydratase family protein | SCAB_RS24490 | Not Available | Positive | 5708331 - 5709077 | 26216.6 |
| tetr/acrr family transcriptional regulator | SCAB_RS24495 | Not Available | Positive | 5709074 - 5709790 | 25219.6 |
| pyridoxamine 5'-phosphate oxidase | SCAB_RS24500 | Not Available | Negative | 5709798 - 5710427 | 23563.3 |
| citrate synthase 2 | SCAB_RS24505 | Not Available | Positive | 5710583 - 5711686 | 39610.3 |
| isopenicillin n synthase family dioxygenase | SCAB_RS24510 | Not Available | Negative | 5711703 - 5712731 | 37180.9 |
| maltokinase n-terminal cap-like domain-containing protein | SCAB_RS24515 | Not Available | Negative | 5713172 - 5713813 | 22558.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |