Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS24375 | Not Available | Negative | 5680330 - 5680869 | 19135.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS24380 | Not Available | Positive | 5680863 - 5681150 | 10273.6 |
| cellulase family glycosylhydrolase | SCAB_RS24385 | Not Available | Positive | 5681330 - 5682880 | 54182.1 |
| alpha/beta hydrolase | SCAB_RS24390 | Not Available | Positive | 5683154 - 5684773 | 57564.3 |
| phosphoserine transaminase | SCAB_RS24395 | Not Available | Negative | 5684845 - 5685963 | 39597.5 |
| cytochrome p450 | SCAB_RS24400 | Not Available | Negative | 5686212 - 5687495 | 46292.1 |
| duf742 domain-containing protein | SCAB_RS24405 | Not Available | Negative | 5687476 - 5687823 | 12444.2 |
| roadblock/lc7 domain-containing protein | SCAB_RS24410 | Not Available | Negative | 5687820 - 5688314 | 16930.9 |
| atp-binding protein | SCAB_RS24415 | Not Available | Negative | 5688311 - 5690605 | 79750.0 |
| fad-binding and (fe-s)-binding domain-containing protein | SCAB_RS24420 | Not Available | Positive | 5690866 - 5693994 | 110412.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |