Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate signaling complex protein phou | SCAB_RS23870 | Not Available | Negative | 5576308 - 5576997 | 25398.4 |
| sensor histidine kinase | SCAB_RS23875 | Not Available | Positive | 5577286 - 5578551 | 44794.2 |
| response regulator transcription factor | SCAB_RS23880 | Not Available | Positive | 5578548 - 5579228 | 25132.5 |
| copper chaperone pcu(a)c | SCAB_RS23885 | Not Available | Negative | 5579300 - 5579992 | 22548.7 |
| card family transcriptional regulator | SCAB_RS23890 | Not Available | Positive | 5580658 - 5581140 | 17830.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SCAB_RS23895 | Not Available | Positive | 5581493 - 5582269 | 26806.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SCAB_RS23900 | Not Available | Positive | 5582259 - 5582789 | 17621.0 |
| cysteine--trna ligase | SCAB_RS23905 | Not Available | Positive | 5583039 - 5584442 | 51826.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | SCAB_RS23910 | Not Available | Positive | 5584565 - 5585506 | 32820.4 |
| doxx family protein | SCAB_RS23915 | Not Available | Positive | 5585635 - 5587362 | 58623.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |