Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglyceromutase | SCAB_RS23835 | Not Available | Positive | 5570513 - 5571274 | 28112.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS23840 | Not Available | Negative | 5571355 - 5571591 | 8554.97 |
| nuclear transport factor 2 family protein | SCAB_RS23845 | Not Available | Negative | 5571850 - 5572365 | 19177.3 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS49420 | Not Available | Positive | 5572766 - 5572859 | 3303.86 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48625 | Not Available | Positive | 5572869 - 5572988 | 5010.24 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | SCAB_RS23850 | Not Available | Negative | 5573025 - 5573789 | 27724.5 |
| hypothetical protein | SCAB_RS23855 | Not Available | Positive | 5573948 - 5574370 | 15745.8 |
| hypothetical protein | SCAB_RS23860 | Not Available | Negative | 5575009 - 5575308 | 10936.8 |
| sco4226 family nickel-binding protein | SCAB_RS23865 | Not Available | Negative | 5575440 - 5575688 | 9187.75 |
| hypothetical protein | SCAB_RS47805 | Not Available | Negative | 5575868 - 5576035 | 5402.31 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |