Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SCAB_RS23430 | Not Available | Negative | 5479616 - 5480416 | 27739.8 |
| nad(p)/fad-dependent oxidoreductase | SCAB_RS23435 | Not Available | Positive | 5480897 - 5482261 | 49719.8 |
| spoiie family protein phosphatase | SCAB_RS23440 | Not Available | Positive | 5482486 - 5484159 | 59279.0 |
| mfs transporter | SCAB_RS23445 | Not Available | Negative | 5484372 - 5485646 | 42998.1 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS23450 | Not Available | Positive | 5485803 - 5486360 | 20668.7 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5487031 - 5488556 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 5488866 - 5491986 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5492081 - 5492197 | Not Available |
| gnat family n-acetyltransferase | SCAB_RS23470 | Not Available | Positive | 5492317 - 5492859 | 19976.4 |
| hypothetical protein | SCAB_RS23475 | Not Available | Positive | 5492896 - 5493285 | 14458.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |