Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS23280 | Not Available | Positive | 5447826 - 5448599 | 26842.0 |
| putative quinol monooxygenase | SCAB_RS23285 | Not Available | Positive | 5448613 - 5448930 | 11642.8 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS23290 | Not Available | Positive | 5448967 - 5449755 | 28308.4 |
| aldo/keto reductase | SCAB_RS23295 | Not Available | Positive | 5449801 - 5450685 | 32198.8 |
| smp-30/gluconolactonase/lre family protein | SCAB_RS23300 | Not Available | Positive | 5450761 - 5451744 | 33590.0 |
| fad-dependent monooxygenase | SCAB_RS23305 | Not Available | Positive | 5451762 - 5452904 | 39584.7 |
| low temperature requirement protein a | SCAB_RS23310 | Not Available | Positive | 5452961 - 5454166 | 42542.0 |
| winged helix-turn-helix domain-containing protein | SCAB_RS23315 | Not Available | Negative | 5454528 - 5454800 | 9760.56 |
| gntr family transcriptional regulator | SCAB_RS23320 | Not Available | Negative | 5454836 - 5455093 | 9162.17 |
| hypothetical protein | SCAB_RS23325 | Not Available | Positive | 5455278 - 5455637 | 13168.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |