Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | SCAB_RS23230 | Not Available | Positive | 5438957 - 5439496 | 19525.5 |
| dctp deaminase domain-containing protein | SCAB_RS23235 | Not Available | Positive | 5439493 - 5440029 | 19026.9 |
| glycosyltransferase family 4 protein | SCAB_RS23240 | Not Available | Positive | 5440026 - 5441141 | 39696.5 |
| serine hydrolase domain-containing protein | SCAB_RS23245 | Not Available | Positive | 5441242 - 5442285 | 37959.8 |
| hypothetical protein | SCAB_RS23250 | Not Available | Negative | 5442348 - 5443529 | 44050.4 |
| nudix domain-containing protein | SCAB_RS23255 | Not Available | Positive | 5443671 - 5444177 | 18541.9 |
| helix-turn-helix transcriptional regulator | SCAB_RS23260 | Not Available | Positive | 5444296 - 5445189 | 32509.5 |
| carboxymuconolactone decarboxylase family protein | SCAB_RS23265 | Not Available | Positive | 5445461 - 5445790 | 11872.2 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS23270 | Not Available | Positive | 5445822 - 5446664 | 30196.7 |
| aldo/keto reductase | SCAB_RS23275 | Not Available | Positive | 5446751 - 5447731 | 35755.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |