Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 5351468 - 5351540 | Not Available |
| response regulator transcription factor | SCAB_RS22730 | Not Available | Negative | 5351564 - 5352208 | 22172.6 |
| sensor histidine kinase | SCAB_RS22735 | Not Available | Negative | 5352205 - 5353533 | 45690.4 |
| abc transporter permease | SCAB_RS22740 | Not Available | Negative | 5353547 - 5354404 | 29484.6 |
| abc transporter atp-binding protein | SCAB_RS22745 | Not Available | Negative | 5354401 - 5355438 | 36905.9 |
| Trna-gly | Not Available | Not Available | Positive | 5355639 - 5355711 | Not Available |
| histone-like nucleoid-structuring protein lsr2 | SCAB_RS22760 | Not Available | Negative | 5356026 - 5356343 | 11475.6 |
| phosphoribosylformylglycinamidine synthase subunit purs | SCAB_RS22765 | Not Available | Positive | 5356685 - 5356948 | 9531.43 |
| phosphoribosylformylglycinamidine synthase subunit purq | SCAB_RS22770 | Not Available | Positive | 5356945 - 5357625 | 24696.5 |
| phosphoribosylformylglycinamidine synthase subunit purl | SCAB_RS22775 | Not Available | Positive | 5357622 - 5359880 | 79990.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |