Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | SCAB_RS22590 | Not Available | Negative | 5321156 - 5322022 | 32000.0 |
| taud/tfda dioxygenase family protein | SCAB_RS22595 | Not Available | Negative | 5322097 - 5323074 | 36120.7 |
| nad(p)-dependent oxidoreductase | SCAB_RS22600 | Not Available | Positive | 5323291 - 5324241 | 31938.8 |
| cation:proton antiporter regulatory subunit | SCAB_RS22605 | Not Available | Negative | 5324270 - 5324755 | 17163.5 |
| hypothetical protein | SCAB_RS22615 | Not Available | Positive | 5325166 - 5325612 | 15542.2 |
| hypothetical protein | SCAB_RS22620 | Not Available | Positive | 5325760 - 5326110 | 11686.2 |
| helix-turn-helix transcriptional regulator | SCAB_RS22625 | Not Available | Negative | 5326267 - 5327286 | 37042.3 |
| llm class flavin-dependent oxidoreductase | SCAB_RS22630 | Not Available | Positive | 5327554 - 5328516 | 33816.8 |
| daptide biosynthesis ripp recognition protein | SCAB_RS22635 | Not Available | Positive | 5328537 - 5329580 | 35727.9 |
| daptide-type ripp biosynthesis methyltransferase | SCAB_RS22640 | Not Available | Positive | 5329589 - 5330476 | 31124.2 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |