Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | SCAB_RS22390 | Not Available | Positive | 5278180 - 5279838 | 59912.4 |
| pas domain-containing protein | SCAB_RS22395 | Not Available | Negative | 5279918 - 5284912 | 167726.0 |
| ssi family serine proteinase inhibitor | SCAB_RS22400 | Not Available | Negative | 5285266 - 5285817 | 18715.2 |
| Trna-ser | Not Available | Not Available | Positive | 5286031 - 5286121 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5286320 - 5286392 | Not Available |
| m23 family metallopeptidase | SCAB_RS22415 | Not Available | Positive | 5286642 - 5287916 | 45826.2 |
| hypothetical protein | SCAB_RS22420 | Not Available | Positive | 5288089 - 5288310 | 7894.71 |
| duf2797 domain-containing protein | SCAB_RS22425 | Not Available | Positive | 5288492 - 5289382 | 30947.4 |
| antibiotic biosynthesis monooxygenase family protein | SCAB_RS22430 | Not Available | Positive | 5289490 - 5290020 | 18996.7 |
| response regulator transcription factor | SCAB_RS22435 | Not Available | Positive | 5290273 - 5291013 | 27338.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |