Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS22250 | Not Available | Negative | 5254025 - 5254519 | 18147.9 |
| Trna-ser | Not Available | Not Available | Positive | 5254685 - 5254769 | Not Available |
| hypothetical protein | SCAB_RS47395 | Not Available | Positive | 5254899 - 5255066 | 6266.72 |
| fic family protein | SCAB_RS45165 | Not Available | Positive | 5255697 - 5257040 | 51070.4 |
| is481 family transposase | SCAB_RS22260 | Not Available | Positive | 5257528 - 5259324 | 64915.9 |
| hypothetical protein | SCAB_RS22265 | Not Available | Negative | 5259365 - 5259811 | 16645.6 |
| hypothetical protein | SCAB_RS22270 | Not Available | Negative | 5259834 - 5260226 | 15039.7 |
| atp-binding protein | SCAB_RS22275 | Not Available | Negative | 5260220 - 5260648 | 14994.5 |
| nudix hydrolase | SCAB_RS22280 | Not Available | Negative | 5260695 - 5261102 | 14652.5 |
| gntr family transcriptional regulator | SCAB_RS22285 | Not Available | Positive | 5261210 - 5261998 | 28994.6 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |